Thermodynamics of information, Nature Physics, vol.11, issue.2, pp.131-139, 2015. ,
Entropy Production along a Stochastic Trajectory and an Integral Fluctuation Theorem, Physical Review Letters, vol.95, issue.4, p.40602, 2005. ,
Equilibrium free-energy differences from nonequilibrium measurements: A master-equation approach, Physical Review E, vol.56, issue.5, pp.5018-5035, 1997. ,
Nonequilibrium work theorem for a system strongly coupled to a thermal environment, Journal of Statistical Mechanics: Theory and Experiment, vol.2004, issue.09, p.P09005, 2004. ,
Equalities and Inequalities: Irreversibility and the Second Law of Thermodynamics at the Nanoscale, Annual Review of Condensed Matter Physics, vol.2, issue.1, pp.329-351, 2011. ,
Nonequilibrium thermodynamics at the microscale: Work relations and the second law, Physica A: Statistical Mechanics and its Applications, vol.389, issue.20, pp.4406-4417, 2010. ,
, Journal of Statistical Physics, vol.90, issue.5/6, pp.1481-1487, 1998.
Entropy production fluctuation theorem and the nonequilibrium work relation for free energy differences, Physical Review E, vol.60, issue.3, pp.2721-2726, 1999. ,
Equilibrium Information from Nonequilibrium Measurements in an Experimental Test of Jarzynski's Equality, Science, vol.296, issue.5574, pp.1832-1835, 2002. ,
Verification of the Crooks fluctuation theorem and recovery of RNA folding free energies, Nature, vol.437, issue.7056, pp.231-234, 2005. ,
Stochastic thermodynamics: principles and perspectives, The European Physical Journal B, vol.64, issue.3-4, pp.423-431, 2008. ,
, Journal of Statistical Physics, vol.107, issue.3/4, pp.781-803, 2002.
Overstretching and force-driven strand separation of double-helix DNA, Physical Review E, vol.70, issue.1, p.11910, 2004. ,
URL : https://hal.archives-ouvertes.fr/hal-00145485
The Biology of Left-handed Z-DNA, Journal of Biological Chemistry, vol.271, issue.20, pp.11595-11598, 1996. ,
Meselson-Radding Model Of Recombination (1975 Proc Natl Acad Sci USA 72:358), Proc. Natl. Acad. Sci. USA, vol.80, p.6206 ,
Torque Spectroscopy of DNA: Base-Pair Stability, Boundary Effects, Backbending, and Breathing Dynamics, Physical Review Letters, vol.110, issue.17, p.178103, 2013. ,
Annealed Random Copolymer Model of the B-Z Transition in DNA: Torsional Responses, Biophysical Journal, vol.108, issue.10, pp.2562-2572, 2015. ,
In This Issue, Proceedings of the National Academy of Sciences, vol.107, issue.5, pp.1809-1810, 2010. ,
DNA Supercoiling, DNA Structure and Function, pp.95-133, 1994. ,
Rare events and the convergence of exponentially averaged work values, Physical Review E, vol.73, issue.4, p.46105, 2006. ,
Path-ensemble averages in systems driven far from equilibrium, Physical Review E, vol.61, issue.3, pp.2361-2366, 2000. ,
Recovery of Free Energy Branches in Single Molecule Experiments, Physical Review Letters, vol.102, issue.7, p.70602, 2009. ,
From free energy measurements to thermodynamic inference in nonequilibrium small systems, New Journal of Physics, vol.17, issue.7, p.075009, 2015. ,
Experimental free-energy measurements of kinetic molecular states using fluctuation theorems, Nature Physics, vol.8, issue.9, pp.688-694, 2012. ,
URL : https://hal.archives-ouvertes.fr/hal-01635957
Experimental measurement of binding energy, selectivity, and allostery using fluctuation theorems, Science, vol.355, issue.6323, pp.412-415, 2017. ,
A Differential Fluctuation Theorem?, The Journal of Physical Chemistry B, vol.112, issue.19, pp.6168-6174, 2008. ,
Helices at interfaces, EPL (Europhysics Letters), vol.100, issue.2, p.28001, 2012. ,
Super-helical filaments at surfaces: dynamics and elastic responses, Soft Matter, vol.14, issue.12, pp.2346-2356, 2018. ,
Adsorption of a Helical Filament Subject to Thermal Fluctuations, Polymers, vol.12, issue.1, p.192, 2020. ,
URL : https://hal.archives-ouvertes.fr/hal-02992563
, Physics of Complex Colloids, pp.155-193, 2013.
, JKPS, vol.3, issue.1, p.1413, 2018.
Stochastic thermodynamics, fluctuation theorems and molecular machines, Reports on Progress in Physics, vol.75, issue.12, p.126001, 2012. ,
Comparison of work fluctuation relations, Journal of Statistical Mechanics: Theory and Experiment, vol.2007, issue.11, pp.P11002-P11002, 2007. ,
, Phys. Rev. E, vol.92, issue.1, p.12131, 2015.
On Information and Sufficiency, The Annals of Mathematical Statistics, vol.22, issue.1, pp.79-86, 1951. ,
Elements of Information Theory, Elements of information theory, 1991. ,
Generalization of the second law for a nonequilibrium initial state, Physics Letters A, vol.374, issue.8, pp.1001-1004, 2010. ,
Experimental demonstration of information-to-energy conversion and validation of the generalized Jarzynski equality, Nature Physics, vol.6, issue.12, pp.988-992, 2010. ,
Nonequilibrium thermodynamics and information theory: basic concepts and relaxing dynamics, Journal of Physics A: Mathematical and Theoretical, vol.50, issue.45, p.454001, 2017. ,
Efficient, Multiple-Range Random Walk Algorithm to Calculate the Density of States, Physical Review Letters, vol.86, issue.10, pp.2050-2053, 2001. ,
Wang-Landau Algorithm for Continuous Models and Joint Density of States, Physical Review Letters, vol.96, issue.12, p.120201, 2006. ,
Improving Free-Energy Estimates from Unidirectional Work Measurements: Theory and Experiment, Physical Review Letters, vol.107, issue.6, p.60601, 2011. ,
Coil-globule type transitions in polymers. 2. Theory of coil-globule transition in linear macromolecules, Macromolecules, vol.24, issue.7, pp.1554-1560, 1991. ,
Quantitative theory of the globule-to-coil transition. 1. Link density distribution in a globule and its radius of gyration, Macromolecules, vol.25, issue.7, pp.1970-1979, 1992. ,
Unified View on the Mean-Field Order of Coil?Globule Transition, ACS Macro Letters, vol.2, issue.11, pp.952-954, 2013. ,
Collapse dynamics of a polymer chain: Theory and simulation, Europhysics Letters (EPL), vol.59, issue.3, pp.391-397, 2002. ,