Changes in the 619 drinking water microbiome: effects of water treatments along the flow of two drinking water 620 treatment plants in a urbanized area, p.2557, 2018. ,
Master recyclers: features and functions 622 of bacteria associated with phytoplankton blooms, Nat Rev Microbiol, vol.12, pp.686-698, 2014. ,
Bacterial diversity impacts as a result of 624 combined sewer overflow in a polluted waterway, Global Journal of Environmental Science and 625 Management-Gjesm, vol.3, pp.437-446, 2017. ,
Phylogeny and classification of phylum Cercozoa (Protozoa), 2003. ,
, Protist, vol.154, pp.341-358
Comparison of microbial 629 communities across sections of a corroding sewer pipe and the effects of wastewater flooding, Biofouling, vol.630, pp.780-792, 2017. ,
Profile of 632 microbial communities on carbonate stones of the medieval church of San Leonardo di Siponto 633 (Italy) by Illumina-based deep sequencing, Applied Microbiology and Biotechnology, vol.100, pp.8537-8548, 2016. ,
The frictional resistance induced by 635 bacterial based biofouling in drainage pipelines, Journal of Hydraulic Research, vol.55, pp.269-283, 2017. ,
) particles, and lead, Environmental Monitoring and Assessment, vol.170, pp.331-343, 2013. ,
Succession of bacterial and fungal communities within 643 biofilms of a chlorinated drinking water distribution system, Water Research, vol.141, pp.74-85, 2018. ,
Understanding microbial 645 ecology to improve management of drinking water distribution systems, Wiley Interdisciplinary 646 Reviews-Water, vol.6, p.1325, 2019. ,
Wastewater treatment effluent reduces the abundance 648 and diversity of benthic bacterial communities in urban and suburban rivers, Applied and 649 Environmental Microbiology, vol.79, pp.1897-1905, 2013. ,
Temporal variability of the bioaerosol background at a 651 subway station: concentration level, size distribution, and diversity of airborne bacteria, Applied 652 and Environmental Microbiology, vol.80, pp.257-270, 2014. ,
Characterization of airborne bacteria at 654 an underground subway station, Applied and Environmental Microbiology, vol.78, pp.1917-1929, 2012. ,
, , p.656, 2018.
, Application of metagenomic methods for selection of an optimal growth medium for bacterial 657 diversity analysis of microbiocenoses on historical stone surfaces, International Biodeterioration & 658 Biodegradation, vol.131, pp.2-10
Time-dependent size-resolved metagenomics uncover antibiotic resistance reservoirs in coastal beach and sewage waters, 2017. ,
, , p.35
Novel widespread marine 667 Oomycetes parasitising Diatoms, including the toxic genus Pseudo-nitzschia: genetic, 668 morphological, and ecological characterisation, Frontiers in Microbiology, vol.9, p.2918, 2018. ,
Epilithic 670 and endolithic microorganisms and deterioration on stone church facades subject to urban 671 pollution in a sub-tropical climate, Biofouling, vol.33, pp.113-127, 2017. ,
Bacterial composition 673 in a metropolitan drinking water distribution system utilizing different source waters, Journal of 674 Water and Health, vol.13, pp.140-151, 2015. ,
The ecodist package for dissimilarity-based analysis of ecological 676 data, Journal of Statistical Software, vol.22, pp.1-19, 2007. ,
Cooccur: probabilistic species co-occurrence analysis in 678 R, J Statistical Software, vol.69, pp.1-17, 2016. ,
Discovery of dark matter fungi in 680 aquatic ecosystems demands a reappraisal of the phylogeny and ecology of zoosporic fungi, Fungal 681 Ecology, vol.19, pp.28-38, 2016. ,
The Protist Ribosomal Transitions in bacterial communities along the 2000 km salinity gradient of the Baltic Sea, ISME J, vol.5, pp.689-1571, 2013. ,
Cohesion: a method for quantifying the connectivity of 691 microbial communities, ISME Journal, vol.11, pp.2426-2438, 2017. ,
Keystone taxa predict compositional change in microbial 693 communities, Environmental Microbiology, vol.20, pp.2207-2217, 2018. ,
Aquatic urban ecology at the scale of a 695 capital: community structure and interactions in street gutters, ISME Journal, vol.12, pp.253-266, 2018. ,
Urban transit 697 system microbial communities differ by surface type and interaction with humans and the 698 environment, 2016. ,
A preliminary 700 account of the Cucurbitariaceae, Stud Mycol, vol.90, pp.71-118, 2018. ,
Trees and streets as drivers of urban stormwater 702 nutrient pollution, Environmental Science & Technology, vol.51, pp.9569-9579, 2017. ,
Wastewater-enhanced 704 microbial corrosion of concrete sewers, Environmental Science & Technology, vol.50, pp.8084-8092, 2016. ,
Quantification of small-scale variation in the size and 706 composition of phenanthrene-degrader populations and PAH contaminants in traffic-impacted, 2014. ,
First survey of aquatic microbial Fungi-712 like Pythiaceae predominantly colonizing the south-Mediterranean freshwater wetlands, Journal of Pharmaceutical Biological and Chemical Sciences, vol.713, pp.3067-3078, 2016. ,
Architectural 715 design influences the diversity and structure of the built environment microbiome, ISME Journal, vol.6, pp.716-1469, 2012. ,
The health 718 impacts of traffic-related exposures in urban areas: Understanding real effects, underlying driving 719 forces and co-producing future directions, Journal of Transport & Health, vol.3, pp.249-267, 2016. ,
Phylogenetic 721 diversity and ecophysiology of Candidate phylum Saccharibacteria in activated sludge, FEMS 722 Microbiol Ecol, vol.92, p.78, 2016. ,
Development of a dual-724 index sequencing strategy and curation pipeline for analyzing amplicon sequence data on the 725, 2013. ,
, MiSeq Illumina sequencing platform, Appl Environ Microbiol, vol.79, pp.5112-5120
Circos: An 727 information aesthetic for comparative genomics, Genome Research, vol.19, pp.1639-1645, 2009. ,
Infection of Coscinodiscus granii by the parasitoid nanoflagellate subway network: diversity and dynamics, Appl Environ Microbiol, vol.80, pp.6760-6770, 1999. ,
Microbial diversity and community structure on 736 corroding concretes, Geomicrobiology Journal, vol.29, pp.450-458, 2012. ,
The Ecology of acidophilic microorganisms in the 738 corroding concrete sewer environment, Frontiers in Microbiology, vol.8, p.683, 2017. ,
Cave drip water-740 related samples as a natural environment for aromatic hydrocarbon-degrading bacteria, vol.7, p.33, 2019. ,
The unexpected habitat in sewer pipes for the propagation of 743 microbial communities and their imprint on urban waters, Curr Opin Biotechnol, vol.57, pp.34-41, 2019. ,
Common processes in 745 pathogenesis by fungal and oomycete plant pathogens, described with Gene Ontology terms, BMC 746 Microbiology, vol.9, p.7, 2009. ,
, , 2015.
Background levels of micro-751 organisms in the busy urban environment of transport hubs, Journal of Applied Microbiology, vol.125, pp.752-1541, 2018. ,
, full-scale spatio-temporal study to monitor water quality in the Paris distribution system, Water Res, vol.759, pp.375-385
The SILVA ribosomal RNA 761 gene database project: improved data processing and web-based tools, Nucleic Acids Research, vol.41, pp.762-590, 2013. ,
Sunlight-exposed biofilm 764 microbial communities are naturally resistant to chernobyl ionizing-radiation levels, PLOS One, vol.6, p.21764, 2011. ,
, , p.767, 2016.
, From the tunnels into the treetops: new lineages of black Yeasts from biofilm in the Stockholm 768 metro system and their relatives among Ant-associated Fungi in the Chaetothyriales, PLOS One, vol.11, p.163396
Diagnosis of the Diatom community upon biofilm 771 development on stainless steels in natural freshwater, 2017. ,
VSEARCH: a versatile open source tool 773 for metagenomics, vol.4, p.2584, 2016. ,
, , p.775
Analysis of a phenol-adapted microbial community: degradation capacity, 776 taxonomy and metabolic description, Journal of Applied Microbiology, vol.126, pp.771-779, 2019. ,
Zoosporic 781 parasites infecting marine diatoms -A black box that needs to be opened, Fungal Ecology, vol.19, pp.59-76, 2016. ,
Communicating the 783 promise, risks, and ethics of large-scale, open space microbiome and metagenome research, 2017. ,
, Microbiome, vol.5, p.132
Biodegradation of polycyclic aromatic hydrocarbons by 786, 2001. ,
, Sphingomonas strains isolated from the terrestrial subsurface, Journal of Industrial Microbiology & 787 Biotechnology, vol.26, pp.283-289
Genomewide 789 characterisation of the genetic diversity of carotenogenesis in bacteria of the order 790, Sphingomonadales. Microbial Genomics, vol.4, p.172, 2018. ,
Host-specific adaptation governs the 792 interaction of the marine diatom, Pseudo-nitzschia and their microbiota, ISME J, vol.8, pp.63-76, 2014. ,
Draft genome 794 sequences of the black rock fungus Knufia petricola and its spontaneous nonmelanized mutant, 2017. ,
, Genome Announcements, vol.5, pp.1242-01217
Ubiquitous marine bacterium inhibits diatom cell 797 division, ISME Journal, vol.11, pp.31-42, 2017. ,
A probabilistic model for analysing species co-occurrence. Global Ecology and transfers from the surface of infiltration basins to groundwater, Science of the Total Environment, vol.803, pp.1496-1507, 2013. ,
Soil bacterial 805 diversity Is associated with human population density in urban greenspaces, Environmental Science, vol.806, pp.5115-5124, 2018. ,
2012) mvabund-an R package for model-based 808 analysis of multivariate abundance data, Methods in Ecology and Evolution, vol.3, pp.471-474 ,
Distance-based multivariate analyses confound location 810 and dispersion effects, Methods in Ecology and Evolution, vol.3, pp.89-101, 2012. ,
Normalization and 812 microbial differential abundance strategies depend upon data characteristics, vol.5, p.27, 2017. ,
OptiClust, an improved method for assigning amplicon-based 814 sequence data to operational taxonomic units, Msphere, vol.2, pp.73-90, 2017. ,
Factors influencing water quality indices in a typical 816 urban river originated with reclaimed water, Frontiers of Environmental Science & Engineering, vol.11, 2017. ,
Antibiotic concentration and 819 antibiotic-resistant bacteria in two shallow urban lakes after stormwater event, Science and Pollution Research, vol.820, pp.9984-9992, 2016. ,
Barcoding diatoms: evaluation of the V4, 2011. ,