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Journal Articles Journal of Proteome Research Year : 2019

mineXpert : Biological Mass Spectrometry Data Visualization and Mining with Full JavaScript Ability

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Abstract

Biological mass spectrometry mainly comprises three elds of endeavour, namely, proteomics, metabolomics and structural biology. In each of these specialties, the mass spectrometrist needs to access MS 1 mass spectral data, although not necessarily on the same basis. For example, the bottom-up proteomics scientist will occasionally access MS 1 data in order to perform data inspection, quality assessments and quantitation measurements, while top-down proteomics, structural biology or metabolomics scientists will actually spend most of their time mining prole-mode MS 1 data. Furthermore, the advent of ion mobilitymass spectrometry imposes new manners of mass spectral data visualization. An open-source MS 1-only mass data visualization software for the desktop was developed to allow scientists to visualize conventional and drift time mass data. Various mass data integrations are possible, allowing a thorough mass spectral 1
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Dates and versions

hal-02379614 , version 1 (25-11-2019)

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Filippo Rusconi. mineXpert : Biological Mass Spectrometry Data Visualization and Mining with Full JavaScript Ability. Journal of Proteome Research, 2019, 18 (5), pp.2254-2259. ⟨10.1021/acs.jproteome.9b00099⟩. ⟨hal-02379614⟩
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