mineXpert : Biological Mass Spectrometry Data Visualization and Mining with Full JavaScript Ability
Abstract
Biological mass spectrometry mainly comprises three elds of endeavour, namely, proteomics, metabolomics and structural biology. In each of these specialties, the mass spectrometrist needs to access MS 1 mass spectral data, although not necessarily on the same basis. For example, the bottom-up proteomics scientist will occasionally access MS 1 data in order to perform data inspection, quality assessments and quantitation measurements, while top-down proteomics, structural biology or metabolomics scientists will actually spend most of their time mining prole-mode MS 1 data. Furthermore, the advent of ion mobilitymass spectrometry imposes new manners of mass spectral data visualization. An open-source MS 1-only mass data visualization software for the desktop was developed to allow scientists to visualize conventional and drift time mass data. Various mass data integrations are possible, allowing a thorough mass spectral 1
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